Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RAB40CQ96S21 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC068669.1-201ENST00000623793 2228 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 DUTP3-201ENST00000450025 415 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC114781.1-201ENST00000450559 1028 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC018638.5-201ENST00000450885 754 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 DEFA8P-201ENST00000457582 285 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ZNF767P-206ENST00000513792 565 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 GAS7-216ENST00000583882 553 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ACTBP9-201ENST00000587663 1099 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC015936.1-201ENST00000591013 1028 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AC009145.4-201ENST00000625119 1294 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 AL512378.1-201ENST00000394808 2100 ntBASIC10.54□□□□□ -0.72
RAB40CQ96S21 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RAB40CQ96S21 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC10.54□□□□□ -0.72
RAB40CQ96S21 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 PTPRD-AS2-201ENST00000429581 2838 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 FUT10-211ENST00000524021 2042 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC026904.1-201ENST00000430626 3549 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms