Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A1P43005 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 PCDHGB8P-202ENST00000507007 2873 ntBASIC13.56□□□□□ -0.24
SLC1A1P43005 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 STRADA-253ENST00000640979 2086 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A1P43005 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
SLC1A1P43005 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 AL356653.1-201ENST00000402743 360 ntBASIC13.56□□□□□ -0.24
SLC1A1P43005 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A1P43005 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 MIR4649-201ENST00000582839 64 ntBASIC13.56□□□□□ -0.24
SLC1A1P43005 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A1P43005 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.56□□□□□ -0.24
SLC1A1P43005 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SLC1A1P43005 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A1P43005 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 CCT7P1-201ENST00000406551 1611 ntBASIC13.55□□□□□ -0.24
SLC1A1P43005 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 IQCF4-203ENST00000428561 420 ntBASIC13.55□□□□□ -0.24
SLC1A1P43005 AC010086.2-201ENST00000428616 226 ntBASIC13.55□□□□□ -0.24
SLC1A1P43005 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.55□□□□□ -0.24
SLC1A1P43005 RN7SL128P-201ENST00000467883 305 ntBASIC13.55□□□□□ -0.24
SLC1A1P43005 AADAC-202ENST00000488869 719 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SLC1A1P43005 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 AL357054.4-201ENST00000606285 2814 ntBASIC13.55□□□□□ -0.24
SLC1A1P43005 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 KCNH8-201ENST00000328405 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SLC1A1P43005 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SLC1A1P43005 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC13.55□□□□□ -0.24
SLC1A1P43005 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC1A1P43005 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SLC1A1P43005 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms