Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 OR7E37P-201ENST00000421076 897 ntBASIC12.3□□□□□ -0.44
SCN2BO60939 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 SNORA47-201ENST00000458862 138 ntBASIC12.3□□□□□ -0.44
SCN2BO60939 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.3□□□□□ -0.44
SCN2BO60939 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC12.3□□□□□ -0.44
SCN2BO60939 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 DNM1P30-201ENST00000563586 452 ntBASIC12.3□□□□□ -0.44
SCN2BO60939 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.3□□□□□ -0.44
SCN2BO60939 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.3□□□□□ -0.44
SCN2BO60939 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.3□□□□□ -0.44
SCN2BO60939 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCN2BO60939 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SCN2BO60939 AC005549.1-201ENST00000579438 1629 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC12.29□□□□□ -0.44
SCN2BO60939 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC12.29□□□□□ -0.44
SCN2BO60939 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 HRC-203ENST00000595625 2044 ntTSL 5 BASIC12.29□□□□□ -0.44
SCN2BO60939 NBPF13P-201ENST00000444082 1783 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.29□□□□□ -0.44
SCN2BO60939 MPV17-209ENST00000405983 859 ntTSL 5 BASIC12.29□□□□□ -0.44
SCN2BO60939 MAGEA5-201ENST00000446757 942 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 AL049597.1-201ENST00000447415 555 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SCN2BO60939 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC12.29□□□□□ -0.44
SCN2BO60939 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
SCN2BO60939 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.29□□□□□ -0.44
SCN2BO60939 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.29□□□□□ -0.44
SCN2BO60939 AC091304.3-201ENST00000566500 716 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 TRMT112P3-201ENST00000580149 358 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC12.29□□□□□ -0.44
SCN2BO60939 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 AC010503.4-201ENST00000615487 688 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SCN2BO60939 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.29□□□□□ -0.44
SCN2BO60939 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms