Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 RN7SL162P-201ENST00000579233 292 ntBASIC12.84□□□□□ -0.35
SATB2Q9UPW6 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC12.84□□□□□ -0.35
SATB2Q9UPW6 AC008622.3-201ENST00000621170 600 ntBASIC12.84□□□□□ -0.35
SATB2Q9UPW6 SNORA50D-202ENST00000627561 132 ntBASIC12.84□□□□□ -0.35
SATB2Q9UPW6 AL590556.2-202ENST00000636906 844 ntBASIC12.84□□□□□ -0.35
SATB2Q9UPW6 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 AC011477.7-201ENST00000617163 1440 ntBASIC12.84□□□□□ -0.35
SATB2Q9UPW6 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SATB2Q9UPW6 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SATB2Q9UPW6 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
SATB2Q9UPW6 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SATB2Q9UPW6 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
SATB2Q9UPW6 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.83□□□□□ -0.35
SATB2Q9UPW6 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 FAM90A11P-201ENST00000518378 2218 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 SNORD23-201ENST00000408876 110 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC113398.1-201ENST00000464124 406 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 YBX1P3-201ENST00000468366 909 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AF186996.6-201ENST00000485294 149 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PIGCP1-201ENST00000527583 895 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AP003040.1-201ENST00000532044 1024 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 ACTBP9-201ENST00000587663 1099 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC008038.1-201ENST00000634247 1314 ntBASIC12.83□□□□□ -0.36
SATB2Q9UPW6 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms