Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PRICKLE4Q2TBC4 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AC053503.6-201ENST00000623864 1843 ntBASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 COX20P1-201ENST00000366529 357 ntBASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AIG1-203ENST00000367596 559 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AC244197.1-201ENST00000456494 951 ntBASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AC083801.1-201ENST00000491689 358 ntBASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AL805961.2-201ENST00000642139 4817 ntBASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
PRICKLE4Q2TBC4 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 PKMP1-201ENST00000455804 1523 ntBASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.02□□□□□ -0.48
PRICKLE4Q2TBC4 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PRICKLE4Q2TBC4 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms