Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AKR1B1P3-201ENST00000525311 588 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.59□□□□□ -0.23
MTHFRP42898 AC103706.1-201ENST00000561761 679 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 MT1G-204ENST00000569500 305 ntTSL 3 BASIC13.59□□□□□ -0.23
MTHFRP42898 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC13.59□□□□□ -0.23
MTHFRP42898 RN7SL5P-201ENST00000581458 321 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
MTHFRP42898 MIR6871-201ENST00000613433 56 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 AC010335.3-201ENST00000623767 531 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 AL359845.1-201ENST00000458202 1648 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 NBEAP3-201ENST00000420638 1493 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 AC025538.1-201ENST00000510707 1486 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
MTHFRP42898 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 AC073585.1-201ENST00000368895 1328 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MTHFRP42898 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC13.58□□□□□ -0.23
MTHFRP42898 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
MTHFRP42898 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
MTHFRP42898 KRT18P40-201ENST00000599859 1571 ntBASIC13.58□□□□□ -0.23
MTHFRP42898 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.58□□□□□ -0.23
MTHFRP42898 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
MTHFRP42898 LINC00638-201ENST00000555578 2518 ntBASIC13.58□□□□□ -0.23
MTHFRP42898 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 TPI1P3-201ENST00000335020 740 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 SLC25A6P1-201ENST00000412123 775 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 RBPMSLP-201ENST00000433427 502 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 AKIRIN1P2-201ENST00000440655 570 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC13.58□□□□□ -0.24
MTHFRP42898 RN7SL69P-201ENST00000468423 272 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 RPL30-213ENST00000523172 274 ntTSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC13.58□□□□□ -0.24
MTHFRP42898 AC103810.4-201ENST00000578601 257 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 AD000091.1-201ENST00000592379 287 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 AC239600.1-201ENST00000603201 462 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
MTHFRP42898 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
MTHFRP42898 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.58□□□□□ -0.24
MTHFRP42898 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
MTHFRP42898 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.58□□□□□ -0.24
MTHFRP42898 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.58□□□□□ -0.24
MTHFRP42898 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
MTHFRP42898 AC008040.5-201ENST00000599781 1781 ntBASIC13.58□□□□□ -0.24
MTHFRP42898 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MTHFRP42898 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 PARK7-204ENST00000377493 795 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms