Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC004837.1-201ENST00000446267 564 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 FTLP1-201ENST00000449155 526 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 RN7SL181P-201ENST00000462921 277 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SLC1A1P43005 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
SLC1A1P43005 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC13.63□□□□□ -0.23
SLC1A1P43005 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC13.63□□□□□ -0.23
SLC1A1P43005 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.63□□□□□ -0.23
SLC1A1P43005 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.63□□□□□ -0.23
SLC1A1P43005 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC1A1P43005 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.63□□□□□ -0.23
SLC1A1P43005 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC13.63□□□□□ -0.23
SLC1A1P43005 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SLC1A1P43005 AC087045.2-201ENST00000606279 1003 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 MEP1AP1-201ENST00000636082 1097 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SLC1A1P43005 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SLC1A1P43005 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 TPRX1-203ENST00000543508 1526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 ALOX15P2-201ENST00000340858 1897 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SLC1A1P43005 AC011477.7-201ENST00000617163 1440 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SLC1A1P43005 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 CLUHP8-201ENST00000547527 1485 ntBASIC13.62□□□□□ -0.23
SLC1A1P43005 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 AC022497.1-201ENST00000624916 3691 ntBASIC13.62□□□□□ -0.23
SLC1A1P43005 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 AC022080.1-201ENST00000366255 781 ntBASIC13.62□□□□□ -0.23
SLC1A1P43005 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC1A1P43005 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC1A1P43005 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 SRPK2P-201ENST00000523408 1100 ntBASIC13.62□□□□□ -0.23
SLC1A1P43005 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
SLC1A1P43005 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 GOLGA2P10-201ENST00000550961 817 ntBASIC13.62□□□□□ -0.23
SLC1A1P43005 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC1A1P43005 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.62□□□□□ -0.23
SLC1A1P43005 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SLC1A1P43005 AC113385.2-201ENST00000614465 762 ntBASIC13.62□□□□□ -0.23
SLC1A1P43005 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC13.62□□□□□ -0.23
SLC1A1P43005 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 NBPF13P-201ENST00000444082 1783 ntBASIC13.62□□□□□ -0.23
SLC1A1P43005 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SLC1A1P43005 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC13.62□□□□□ -0.23
SLC1A1P43005 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SLC1A1P43005 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC13.62□□□□□ -0.23
SLC1A1P43005 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms