Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
RAB40CQ96S21 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB40CQ96S21 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RAB40CQ96S21 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC10.62□□□□□ -0.71
RAB40CQ96S21 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC10.62□□□□□ -0.71
RAB40CQ96S21 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
RAB40CQ96S21 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 PARGP1-201ENST00000417555 2286 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 KRT18P9-201ENST00000604826 1300 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 SHROOM2P1-201ENST00000434773 2384 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 AL357140.3-201ENST00000639753 1983 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 THEMIS3P-201ENST00000416112 1586 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 KRT8P31-201ENST00000504812 1408 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 BRI3P1-201ENST00000440440 378 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 SCARNA12-201ENST00000459155 270 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 AC095040.1-201ENST00000513286 675 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 NAA40-205ENST00000539656 577 ntTSL 4 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 MIR6769A-201ENST00000617340 73 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 AC244452.3-201ENST00000636814 210 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 AL805961.1-203ENST00000641078 1258 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 TUBB8P5-201ENST00000445286 1351 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 AC008158.1-201ENST00000578759 3668 ntBASIC10.61□□□□□ -0.71
RAB40CQ96S21 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RAB40CQ96S21 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
RAB40CQ96S21 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 TMEM100-205ENST00000575734 1962 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
RAB40CQ96S21 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
RAB40CQ96S21 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms