Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC13.83□□□□□ -0.2
LMO3Q8TAP4 AC073488.1-201ENST00000416620 1600 ntBASIC13.82□□□□□ -0.2
LMO3Q8TAP4 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AL354861.3-201ENST00000600140 2412 ntBASIC13.82□□□□□ -0.2
LMO3Q8TAP4 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AC009108.4-201ENST00000623284 2451 ntBASIC13.82□□□□□ -0.2
LMO3Q8TAP4 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.82□□□□□ -0.2
LMO3Q8TAP4 PIEZO1P1-201ENST00000485427 219 ntBASIC13.82□□□□□ -0.2
LMO3Q8TAP4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AC106872.8-201ENST00000507651 684 ntBASIC13.82□□□□□ -0.2
LMO3Q8TAP4 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 NBPF17P-201ENST00000401087 2119 ntBASIC13.82□□□□□ -0.2
LMO3Q8TAP4 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 USP3-213ENST00000559711 1693 ntTSL 5 BASIC13.82□□□□□ -0.2
LMO3Q8TAP4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 KRT8P46-201ENST00000512037 1426 ntBASIC13.81□□□□□ -0.2
LMO3Q8TAP4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 MPI-208ENST00000563786 1707 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms