Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 KRT18P44-201ENST00000416086 1285 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 CDKN2A-AS1-201ENST00000441769 823 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 YBX1P3-201ENST00000468366 909 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 PRDX2P3-201ENST00000515779 586 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SLC25A51P3-201ENST00000521814 889 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 MED11-202ENST00000573708 802 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 RN7SL602P-201ENST00000578326 324 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 RN7SL718P-201ENST00000581254 303 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 MFSD12-215ENST00000615613 688 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AC011462.4-201ENST00000616866 449 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AL606760.3-201ENST00000569869 3591 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TEF-202ENST00000406644 4386 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 LINC00563-201ENST00000566370 1400 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 TUBB8P5-201ENST00000445286 1351 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC139491.6-202ENST00000637171 2077 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AL359092.2-201ENST00000423330 585 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 ALG1L15P-201ENST00000482834 794 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 HNRNPA1P4-201ENST00000509706 756 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 DGAT2L7P-201ENST00000602462 744 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC136475.7-201ENST00000602949 592 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC092535.4-201ENST00000609548 397 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC009041.4-201ENST00000620075 638 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AL357143.1-203ENST00000639750 881 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 Z82170.1-201ENST00000625081 3192 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 DDC-206ENST00000431062 1620 ntTSL 5 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AC073862.3-201ENST00000624597 1648 ntBASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
NPIPA3F8WFD2 AL118506.1-201ENST00000601296 3082 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms