Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 MIR1249-201ENST00000408671 66 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 APRT-202ENST00000426324 664 ntTSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 MTND6P7-201ENST00000433237 524 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 RPL18P1-201ENST00000497218 552 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 ALG1L14P-201ENST00000514230 434 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 HNRNPA1P7-201ENST00000521273 963 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 AP001775.1-201ENST00000532608 586 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 HP-215ENST00000569639 568 ntTSL 4 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 AC091132.3-201ENST00000579701 470 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 AC138645.1-201ENST00000582765 470 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 GBAP1-208ENST00000566701 1546 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 FAM90A22P-201ENST00000400142 1395 ntBASIC12.92□□□□□ -0.34
NCDNQ9UBB6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NCDNQ9UBB6 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 CYP2B7P-201ENST00000541697 1476 ntBASIC12.91□□□□□ -0.34
NCDNQ9UBB6 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 FAM183BP-201ENST00000409072 1595 ntBASIC12.91□□□□□ -0.34
NCDNQ9UBB6 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AC006001.3-205ENST00000428370 579 ntBASIC12.91□□□□□ -0.34
NCDNQ9UBB6 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 GAPDHP76-201ENST00000512278 976 ntBASIC12.91□□□□□ -0.34
NCDNQ9UBB6 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AL033381.2-201ENST00000603854 732 ntBASIC12.91□□□□□ -0.34
NCDNQ9UBB6 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 Z82244.1-201ENST00000631502 840 ntBASIC12.91□□□□□ -0.34
NCDNQ9UBB6 BIN3-212ENST00000640731 450 ntTSL 5 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NCDNQ9UBB6 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms