Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 AL031602.1-201ENST00000633169 911 ntBASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 AC019069.1-201ENST00000610008 1333 ntBASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.71■■□□□ 1.23
HS3ST4Q9Y661 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
HS3ST4Q9Y661 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.7■■□□□ 1.23
HS3ST4Q9Y661 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.7■■□□□ 1.22
HS3ST4Q9Y661 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
HS3ST4Q9Y661 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 AC105265.2-201ENST00000467189 838 ntBASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 AP005435.1-201ENST00000529293 1178 ntBASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
HS3ST4Q9Y661 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 LINC01960-201ENST00000563759 1884 ntBASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.67■■□□□ 1.22
HS3ST4Q9Y661 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST4Q9Y661 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST4Q9Y661 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.66■■□□□ 1.22
HS3ST4Q9Y661 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.66■■□□□ 1.22
HS3ST4Q9Y661 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.66■■□□□ 1.22
HS3ST4Q9Y661 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HS3ST4Q9Y661 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
HS3ST4Q9Y661 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 TSPY26P-201ENST00000476365 1326 ntBASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 IGHV3-19-201ENST00000521488 291 ntBASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 AC068587.7-201ENST00000641602 218 ntBASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HS3ST4Q9Y661 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.64■■□□□ 1.22
HS3ST4Q9Y661 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
HS3ST4Q9Y661 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.64■■□□□ 1.21
HS3ST4Q9Y661 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.64■■□□□ 1.21
HS3ST4Q9Y661 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
HS3ST4Q9Y661 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
HS3ST4Q9Y661 C1orf229-201ENST00000623686 2258 ntBASIC22.64■■□□□ 1.21
HS3ST4Q9Y661 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 ZNRF2P3-201ENST00000424200 374 ntBASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
HS3ST4Q9Y661 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms