Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 AC004687.1-201ENST00000579003 1625 ntBASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 AC068587.7-201ENST00000641602 218 ntBASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC2Q9Y5Z7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 AL109923.1-201ENST00000618799 583 ntBASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.23■■□□□ 1.31
HCFC2Q9Y5Z7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 AL355802.2-201ENST00000402069 882 ntBASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
HCFC2Q9Y5Z7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 SMUG1P1-201ENST00000590640 811 ntBASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC2Q9Y5Z7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.31
HCFC2Q9Y5Z7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
HCFC2Q9Y5Z7 AC142381.3-201ENST00000568208 1670 ntBASIC23.2■■□□□ 1.3
HCFC2Q9Y5Z7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC2Q9Y5Z7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC2Q9Y5Z7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.2■■□□□ 1.3
HCFC2Q9Y5Z7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC2Q9Y5Z7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.2■■□□□ 1.3
HCFC2Q9Y5Z7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 ABHD17AP1-201ENST00000358206 933 ntBASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 NCF1B-203ENST00000435988 1254 ntBASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 AC011767.1-201ENST00000617410 1153 ntBASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.19■■□□□ 1.3
HCFC2Q9Y5Z7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
HCFC2Q9Y5Z7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 AC079630.1-202ENST00000618127 1840 ntBASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC2Q9Y5Z7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms