Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB3Q9Y5G1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 AL136116.3-201ENST00000402907 1138 ntBASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 LINC01529-204ENST00000636474 1715 ntBASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB3Q9Y5G1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGB3Q9Y5G1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHGB3Q9Y5G1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 AL139246.5-201ENST00000606645 996 ntBASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
PCDHGB3Q9Y5G1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 AL512631.2-201ENST00000604634 923 ntBASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB3Q9Y5G1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB3Q9Y5G1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB3Q9Y5G1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms