Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL353803.4-201ENST00000565882 1934 ntBASIC17.57■□□□□ 0.4
LSM4Q9Y4Z0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 AC110285.6-201ENST00000617652 491 ntBASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM4Q9Y4Z0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSM4Q9Y4Z0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM4Q9Y4Z0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 MIR4466-201ENST00000606121 54 ntBASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 AC005837.3-201ENST00000612163 286 ntBASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM4Q9Y4Z0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 AC080038.3-201ENST00000623346 1952 ntBASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM4Q9Y4Z0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM4Q9Y4Z0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM4Q9Y4Z0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM4Q9Y4Z0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.52■□□□□ 0.39
LSM4Q9Y4Z0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 AC096631.2-201ENST00000436136 790 ntBASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM4Q9Y4Z0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms