Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 SLC29A4P1-201ENST00000398760 971 ntBASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 AC007322.1-201ENST00000426983 750 ntBASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 SLC7A5P2-201ENST00000553010 536 ntBASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 MIR4651-201ENST00000582622 73 ntBASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
SIT1Q9Y3P8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.33■■□□□ 1.16
SIT1Q9Y3P8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
SIT1Q9Y3P8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 GUSBP6-202ENST00000438529 1198 ntBASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 AL138781.1-201ENST00000566567 1274 ntBASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 AC005181.1-201ENST00000604782 1256 ntBASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 AC087239.1-201ENST00000622671 572 ntBASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIT1Q9Y3P8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 AL121749.1-202ENST00000609313 2153 ntBASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
SIT1Q9Y3P8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SIT1Q9Y3P8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 AC135731.1-201ENST00000569415 2548 ntBASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 AC010141.3-201ENST00000456659 717 ntBASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 AC093827.2-201ENST00000512654 315 ntBASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 DUX4L16-201ENST00000555130 1264 ntBASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIT1Q9Y3P8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIT1Q9Y3P8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 AC145676.1-201ENST00000514988 2004 ntBASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SIT1Q9Y3P8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SIT1Q9Y3P8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.26■■□□□ 1.15
SIT1Q9Y3P8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
SIT1Q9Y3P8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.26■■□□□ 1.15
SIT1Q9Y3P8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIT1Q9Y3P8 AC069152.1-201ENST00000438030 544 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms