Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
RHBDD3Q9Y3P4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDD3Q9Y3P4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDD3Q9Y3P4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 AC009102.2-201ENST00000606772 1639 ntBASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 AC007375.3-201ENST00000600936 2314 ntBASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RHBDD3Q9Y3P4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 MIR6724-1-201ENST00000616420 92 ntBASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 MIR6724-2-201ENST00000616483 92 ntBASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 MIR6724-4-201ENST00000617390 92 ntBASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 MIR6724-3-201ENST00000622482 92 ntBASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDD3Q9Y3P4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 AC087742.1-201ENST00000575880 1738 ntBASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 AC080038.3-201ENST00000623346 1952 ntBASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RHBDD3Q9Y3P4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RHBDD3Q9Y3P4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RHBDD3Q9Y3P4 LINC01529-204ENST00000636474 1715 ntBASIC19.14■□□□□ 0.66
RHBDD3Q9Y3P4 GUSBP5-201ENST00000418136 578 ntBASIC19.14■□□□□ 0.65
RHBDD3Q9Y3P4 KRT16P3-201ENST00000439127 1283 ntBASIC19.14■□□□□ 0.65
RHBDD3Q9Y3P4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.14■□□□□ 0.65
RHBDD3Q9Y3P4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.14■□□□□ 0.65
RHBDD3Q9Y3P4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms