Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDGFL3Q9Y3E1 PBX2P1-201ENST00000493219 1291 ntBASIC19.77■□□□□ 0.76
HDGFL3Q9Y3E1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.77■□□□□ 0.76
HDGFL3Q9Y3E1 MIR4767-201ENST00000582827 78 ntBASIC19.77■□□□□ 0.76
HDGFL3Q9Y3E1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
HDGFL3Q9Y3E1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDGFL3Q9Y3E1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDGFL3Q9Y3E1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDGFL3Q9Y3E1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDGFL3Q9Y3E1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDGFL3Q9Y3E1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 AC012676.1-201ENST00000574705 1949 ntBASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 LINC01960-201ENST00000563759 1884 ntBASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 AC110285.6-201ENST00000617652 491 ntBASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 AC068587.7-201ENST00000641602 218 ntBASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 AC133561.1-201ENST00000568600 2415 ntBASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HDGFL3Q9Y3E1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 AL139246.5-201ENST00000606645 996 ntBASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HDGFL3Q9Y3E1 C1orf229-201ENST00000623686 2258 ntBASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 AL031602.1-201ENST00000633169 911 ntBASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDGFL3Q9Y3E1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 EDA-201ENST00000338901 1233 ntBASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 BX842568.3-201ENST00000418104 571 ntBASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 AC133561.4-201ENST00000566112 224 ntBASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.73■□□□□ 0.75
HDGFL3Q9Y3E1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.72■□□□□ 0.75
HDGFL3Q9Y3E1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.71■□□□□ 0.75
HDGFL3Q9Y3E1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDGFL3Q9Y3E1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDGFL3Q9Y3E1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms