Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPH3AQ9Y2J0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
RPH3AQ9Y2J0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.08■□□□□ 0.8
RPH3AQ9Y2J0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPH3AQ9Y2J0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
RPH3AQ9Y2J0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 SUDS3P1-201ENST00000505831 966 ntBASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.06■□□□□ 0.8
RPH3AQ9Y2J0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 AL136967.2-201ENST00000623968 743 ntBASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.05■□□□□ 0.8
RPH3AQ9Y2J0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 MIR939-201ENST00000401314 82 ntBASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 AC099791.1-201ENST00000416440 715 ntBASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPH3AQ9Y2J0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 AC027682.1-201ENST00000562846 899 ntBASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 AC010525.1-201ENST00000585559 441 ntBASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 AC233992.3-201ENST00000607491 485 ntBASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPH3AQ9Y2J0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 BX842568.3-201ENST00000418104 571 ntBASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.02■□□□□ 0.8
RPH3AQ9Y2J0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.02■□□□□ 0.79
RPH3AQ9Y2J0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
RPH3AQ9Y2J0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 AC091305.1-201ENST00000479476 895 ntBASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 AC126544.1-201ENST00000580842 1059 ntBASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.01■□□□□ 0.79
RPH3AQ9Y2J0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms