Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB4Q9UN71 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGB4Q9UN71 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 AC137630.3-201ENST00000607245 391 ntBASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 AL031848.2-201ENST00000607670 837 ntBASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGB4Q9UN71 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 SNX5-217ENST00000606557 1087 ntBASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGB4Q9UN71 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 AC073130.3-201ENST00000624389 2278 ntBASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGB4Q9UN71 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PCDHGB4Q9UN71 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGB4Q9UN71 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 AL353803.4-201ENST00000565882 1934 ntBASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGB4Q9UN71 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB4Q9UN71 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB4Q9UN71 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGB4Q9UN71 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGB4Q9UN71 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGB4Q9UN71 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB4Q9UN71 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
PCDHGB4Q9UN71 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHGB4Q9UN71 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB4Q9UN71 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGB4Q9UN71 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGB4Q9UN71 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGB4Q9UN71 BX664725.1-201ENST00000438252 379 ntBASIC21.13■□□□□ 0.97
PCDHGB4Q9UN71 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB4Q9UN71 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGB4Q9UN71 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB4Q9UN71 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGB4Q9UN71 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms