Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AL031848.2-201ENST00000607670 837 ntBASIC22.01■■□□□ 1.11
CPSF2Q9P2I0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF2Q9P2I0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF2Q9P2I0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF2Q9P2I0 AC242852.2-201ENST00000615738 1807 ntBASIC22.01■■□□□ 1.11
CPSF2Q9P2I0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 REST-206ENST00000612429 1376 ntTSL 5 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 REST-207ENST00000616975 1370 ntTSL 5 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF2Q9P2I0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
CPSF2Q9P2I0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF2Q9P2I0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 AC127496.7-201ENST00000625110 1798 ntBASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 AC137630.3-201ENST00000607245 391 ntBASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CPSF2Q9P2I0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.97■■□□□ 1.11
CPSF2Q9P2I0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF2Q9P2I0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 AC144652.1-201ENST00000609974 1624 ntBASIC21.95■■□□□ 1.1
CPSF2Q9P2I0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms