Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALYQ9NYX4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALYQ9NYX4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALYQ9NYX4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.18■□□□□ 0.5
CALYQ9NYX4 AC092171.4-201ENST00000609130 632 ntBASIC18.18■□□□□ 0.5
CALYQ9NYX4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.18■□□□□ 0.5
CALYQ9NYX4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALYQ9NYX4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CALYQ9NYX4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALYQ9NYX4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALYQ9NYX4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CALYQ9NYX4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CALYQ9NYX4 AC087742.1-201ENST00000575880 1738 ntBASIC18.18■□□□□ 0.5
CALYQ9NYX4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.17■□□□□ 0.5
CALYQ9NYX4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.17■□□□□ 0.5
CALYQ9NYX4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.17■□□□□ 0.5
CALYQ9NYX4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CALYQ9NYX4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.17■□□□□ 0.5
CALYQ9NYX4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.17■□□□□ 0.5
CALYQ9NYX4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 AC079834.2-201ENST00000609776 1949 ntBASIC18.17■□□□□ 0.5
CALYQ9NYX4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALYQ9NYX4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALYQ9NYX4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALYQ9NYX4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALYQ9NYX4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.16■□□□□ 0.5
CALYQ9NYX4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALYQ9NYX4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALYQ9NYX4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CALYQ9NYX4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALYQ9NYX4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CALYQ9NYX4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.16■□□□□ 0.5
CALYQ9NYX4 AC133637.1-201ENST00000624115 1537 ntBASIC18.16■□□□□ 0.5
CALYQ9NYX4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.16■□□□□ 0.5
CALYQ9NYX4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALYQ9NYX4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALYQ9NYX4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CALYQ9NYX4 AC242852.2-201ENST00000615738 1807 ntBASIC18.15■□□□□ 0.5
CALYQ9NYX4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALYQ9NYX4 AC131281.2-201ENST00000520478 145 ntBASIC18.15■□□□□ 0.5
CALYQ9NYX4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.15■□□□□ 0.5
CALYQ9NYX4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.15■□□□□ 0.5
CALYQ9NYX4 MIR4466-201ENST00000606121 54 ntBASIC18.15■□□□□ 0.5
CALYQ9NYX4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.15■□□□□ 0.5
CALYQ9NYX4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.15■□□□□ 0.5
CALYQ9NYX4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALYQ9NYX4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CALYQ9NYX4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALYQ9NYX4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.15■□□□□ 0.5
CALYQ9NYX4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CALYQ9NYX4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CALYQ9NYX4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CALYQ9NYX4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CALYQ9NYX4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CALYQ9NYX4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.14■□□□□ 0.5
CALYQ9NYX4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CALYQ9NYX4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CALYQ9NYX4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALYQ9NYX4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALYQ9NYX4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALYQ9NYX4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALYQ9NYX4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALYQ9NYX4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.14■□□□□ 0.49
CALYQ9NYX4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.14■□□□□ 0.49
CALYQ9NYX4 ECEL1P1-201ENST00000373592 1742 ntBASIC18.14■□□□□ 0.49
CALYQ9NYX4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CALYQ9NYX4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CALYQ9NYX4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.13■□□□□ 0.49
CALYQ9NYX4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CALYQ9NYX4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 MIR3181-201ENST00000578512 73 ntBASIC18.13■□□□□ 0.49
CALYQ9NYX4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CALYQ9NYX4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALYQ9NYX4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALYQ9NYX4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALYQ9NYX4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.12■□□□□ 0.49
CALYQ9NYX4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CALYQ9NYX4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALYQ9NYX4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CALYQ9NYX4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.12■□□□□ 0.49
CALYQ9NYX4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
CALYQ9NYX4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CALYQ9NYX4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALYQ9NYX4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.12■□□□□ 0.49
CALYQ9NYX4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms