Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSL2Q9HCI7 AL355001.2-201ENST00000620617 1191 ntBASIC18.83■□□□□ 0.6
MSL2Q9HCI7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.83■□□□□ 0.6
MSL2Q9HCI7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.83■□□□□ 0.6
MSL2Q9HCI7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSL2Q9HCI7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.83■□□□□ 0.6
MSL2Q9HCI7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 SLC47A1P1-202ENST00000449666 945 ntBASIC18.82■□□□□ 0.6
MSL2Q9HCI7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 AC010525.1-201ENST00000585559 441 ntBASIC18.82■□□□□ 0.6
MSL2Q9HCI7 AC008764.7-201ENST00000593779 1081 ntBASIC18.82■□□□□ 0.6
MSL2Q9HCI7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.82■□□□□ 0.6
MSL2Q9HCI7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 AF213884.3-201ENST00000563833 479 ntBASIC18.81■□□□□ 0.6
MSL2Q9HCI7 AC142381.2-201ENST00000566120 298 ntBASIC18.81■□□□□ 0.6
MSL2Q9HCI7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 AL031432.3-201ENST00000607698 485 ntBASIC18.81■□□□□ 0.6
MSL2Q9HCI7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MSL2Q9HCI7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 AP001330.3-201ENST00000520123 633 ntBASIC18.8■□□□□ 0.6
MSL2Q9HCI7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSL2Q9HCI7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 OR2I1P-207ENST00000453522 948 ntBASIC18.79■□□□□ 0.6
MSL2Q9HCI7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MSL2Q9HCI7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 AC099791.1-201ENST00000416440 715 ntBASIC18.78■□□□□ 0.6
MSL2Q9HCI7 BX842568.3-201ENST00000418104 571 ntBASIC18.78■□□□□ 0.6
MSL2Q9HCI7 SUDS3P1-201ENST00000505831 966 ntBASIC18.78■□□□□ 0.6
MSL2Q9HCI7 AC233992.3-201ENST00000607491 485 ntBASIC18.78■□□□□ 0.6
MSL2Q9HCI7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSL2Q9HCI7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.77■□□□□ 0.6
MSL2Q9HCI7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MSL2Q9HCI7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSL2Q9HCI7 MIR939-201ENST00000401314 82 ntBASIC18.77■□□□□ 0.6
MSL2Q9HCI7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms