Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 AL024507.2-201ENST00000606070 2574 ntBASIC21.23■□□□□ 0.99
SOX17Q9H6I2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 MIR935-201ENST00000401179 91 ntBASIC21.23■□□□□ 0.99
SOX17Q9H6I2 AC006455.2-201ENST00000429931 906 ntBASIC21.23■□□□□ 0.99
SOX17Q9H6I2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX17Q9H6I2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 AL031432.3-201ENST00000607698 485 ntBASIC21.22■□□□□ 0.99
SOX17Q9H6I2 AC241377.3-202ENST00000626088 1088 ntBASIC21.22■□□□□ 0.99
SOX17Q9H6I2 AC241585.3-202ENST00000628937 1088 ntBASIC21.22■□□□□ 0.99
SOX17Q9H6I2 AC245100.8-202ENST00000629247 1058 ntBASIC21.22■□□□□ 0.99
SOX17Q9H6I2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX17Q9H6I2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 DUSP8P3-201ENST00000399571 1760 ntBASIC21.21■□□□□ 0.99
SOX17Q9H6I2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.21■□□□□ 0.99
SOX17Q9H6I2 AC009086.3-201ENST00000623486 1008 ntBASIC21.21■□□□□ 0.99
SOX17Q9H6I2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX17Q9H6I2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
SOX17Q9H6I2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 EDA-201ENST00000338901 1233 ntBASIC21.2■□□□□ 0.98
SOX17Q9H6I2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 MIR4767-201ENST00000582827 78 ntBASIC21.2■□□□□ 0.98
SOX17Q9H6I2 AL355001.2-201ENST00000620617 1191 ntBASIC21.2■□□□□ 0.98
SOX17Q9H6I2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SOX17Q9H6I2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.19■□□□□ 0.98
SOX17Q9H6I2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 SUDS3P1-201ENST00000505831 966 ntBASIC21.18■□□□□ 0.98
SOX17Q9H6I2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX17Q9H6I2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 AF213884.3-201ENST00000563833 479 ntBASIC21.17■□□□□ 0.98
SOX17Q9H6I2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX17Q9H6I2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.16■□□□□ 0.98
SOX17Q9H6I2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms