Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 KRT125P-201ENST00000546827 989 ntBASIC24.12■■□□□ 1.45
VPS16Q9H269 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VPS16Q9H269 LINC01960-201ENST00000563759 1884 ntBASIC24.12■■□□□ 1.45
VPS16Q9H269 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VPS16Q9H269 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
VPS16Q9H269 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.12■■□□□ 1.45
VPS16Q9H269 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.11■■□□□ 1.45
VPS16Q9H269 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VPS16Q9H269 FBXW4P1-201ENST00000426721 2239 ntBASIC24.11■■□□□ 1.45
VPS16Q9H269 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VPS16Q9H269 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
VPS16Q9H269 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
VPS16Q9H269 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VPS16Q9H269 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VPS16Q9H269 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
VPS16Q9H269 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VPS16Q9H269 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
VPS16Q9H269 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.1■■□□□ 1.45
VPS16Q9H269 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VPS16Q9H269 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.1■■□□□ 1.45
VPS16Q9H269 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VPS16Q9H269 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.1■■□□□ 1.45
VPS16Q9H269 MIR4787-201ENST00000607364 84 ntBASIC24.1■■□□□ 1.45
VPS16Q9H269 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
VPS16Q9H269 AC009086.3-201ENST00000623486 1008 ntBASIC24.1■■□□□ 1.45
VPS16Q9H269 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
VPS16Q9H269 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.1■■□□□ 1.45
VPS16Q9H269 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
VPS16Q9H269 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
VPS16Q9H269 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
VPS16Q9H269 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VPS16Q9H269 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
VPS16Q9H269 MTDHP2-201ENST00000601468 714 ntBASIC24.09■■□□□ 1.45
VPS16Q9H269 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
VPS16Q9H269 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.09■■□□□ 1.45
VPS16Q9H269 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
VPS16Q9H269 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.09■■□□□ 1.45
VPS16Q9H269 AC004687.1-201ENST00000579003 1625 ntBASIC24.09■■□□□ 1.45
VPS16Q9H269 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.09■■□□□ 1.45
VPS16Q9H269 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.09■■□□□ 1.45
VPS16Q9H269 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
VPS16Q9H269 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.08■■□□□ 1.45
VPS16Q9H269 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.08■■□□□ 1.45
VPS16Q9H269 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.08■■□□□ 1.45
VPS16Q9H269 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS16Q9H269 Z92544.1-202ENST00000571933 1220 ntBASIC24.08■■□□□ 1.45
VPS16Q9H269 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS16Q9H269 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.08■■□□□ 1.45
VPS16Q9H269 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS16Q9H269 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
VPS16Q9H269 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
VPS16Q9H269 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
VPS16Q9H269 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.08■■□□□ 1.44
VPS16Q9H269 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
VPS16Q9H269 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS16Q9H269 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
VPS16Q9H269 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS16Q9H269 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS16Q9H269 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
VPS16Q9H269 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS16Q9H269 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.07■■□□□ 1.44
VPS16Q9H269 RARRES2P1-201ENST00000474487 481 ntBASIC24.07■■□□□ 1.44
VPS16Q9H269 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
VPS16Q9H269 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.07■■□□□ 1.44
VPS16Q9H269 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VPS16Q9H269 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.07■■□□□ 1.44
VPS16Q9H269 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
VPS16Q9H269 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
VPS16Q9H269 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.07■■□□□ 1.44
VPS16Q9H269 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS16Q9H269 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS16Q9H269 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.06■■□□□ 1.44
VPS16Q9H269 AL137060.1-201ENST00000618151 2648 ntBASIC24.06■■□□□ 1.44
VPS16Q9H269 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS16Q9H269 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.06■■□□□ 1.44
VPS16Q9H269 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.06■■□□□ 1.44
VPS16Q9H269 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VPS16Q9H269 AC239859.2-201ENST00000444165 318 ntBASIC24.06■■□□□ 1.44
VPS16Q9H269 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS16Q9H269 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
VPS16Q9H269 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VPS16Q9H269 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
VPS16Q9H269 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
VPS16Q9H269 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS16Q9H269 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
VPS16Q9H269 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS16Q9H269 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS16Q9H269 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS16Q9H269 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VPS16Q9H269 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS16Q9H269 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
VPS16Q9H269 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VPS16Q9H269 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS16Q9H269 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.05■■□□□ 1.44
VPS16Q9H269 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
VPS16Q9H269 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
VPS16Q9H269 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.04■■□□□ 1.44
VPS16Q9H269 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS16Q9H269 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
VPS16Q9H269 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms