Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
ALX4Q9H161 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ALX4Q9H161 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.53■□□□□ 0.56
ALX4Q9H161 AL353803.4-201ENST00000565882 1934 ntBASIC18.53■□□□□ 0.56
ALX4Q9H161 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALX4Q9H161 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.53■□□□□ 0.56
ALX4Q9H161 RPS2P7-201ENST00000447334 885 ntBASIC18.53■□□□□ 0.56
ALX4Q9H161 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.53■□□□□ 0.56
ALX4Q9H161 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ALX4Q9H161 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.53■□□□□ 0.56
ALX4Q9H161 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.53■□□□□ 0.56
ALX4Q9H161 AC092667.1-201ENST00000434301 2586 ntBASIC18.53■□□□□ 0.56
ALX4Q9H161 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ALX4Q9H161 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.53■□□□□ 0.56
ALX4Q9H161 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ALX4Q9H161 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.52■□□□□ 0.56
ALX4Q9H161 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALX4Q9H161 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ALX4Q9H161 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALX4Q9H161 KRT8P33-201ENST00000508125 1423 ntBASIC18.52■□□□□ 0.56
ALX4Q9H161 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ALX4Q9H161 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALX4Q9H161 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.52■□□□□ 0.56
ALX4Q9H161 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALX4Q9H161 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ALX4Q9H161 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ALX4Q9H161 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ALX4Q9H161 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ALX4Q9H161 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ALX4Q9H161 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.51■□□□□ 0.55
ALX4Q9H161 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.51■□□□□ 0.55
ALX4Q9H161 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.51■□□□□ 0.55
ALX4Q9H161 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 PVT1_1.1-201ENST00000615125 194 ntBASIC18.51■□□□□ 0.55
ALX4Q9H161 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.51■□□□□ 0.55
ALX4Q9H161 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALX4Q9H161 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.5■□□□□ 0.55
ALX4Q9H161 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 AC244015.2-201ENST00000616358 1861 ntBASIC18.5■□□□□ 0.55
ALX4Q9H161 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ALX4Q9H161 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.5■□□□□ 0.55
ALX4Q9H161 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.5■□□□□ 0.55
ALX4Q9H161 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 AC087393.1-201ENST00000582896 145 ntBASIC18.5■□□□□ 0.55
ALX4Q9H161 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALX4Q9H161 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ALX4Q9H161 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.49■□□□□ 0.55
ALX4Q9H161 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 AC131274.2-201ENST00000580697 1507 ntBASIC18.49■□□□□ 0.55
ALX4Q9H161 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 AL592295.1-201ENST00000400984 884 ntBASIC18.49■□□□□ 0.55
ALX4Q9H161 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.49■□□□□ 0.55
ALX4Q9H161 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.49■□□□□ 0.55
ALX4Q9H161 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.49■□□□□ 0.55
ALX4Q9H161 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALX4Q9H161 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.48■□□□□ 0.55
ALX4Q9H161 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.48■□□□□ 0.55
ALX4Q9H161 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ALX4Q9H161 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 RARRES2P1-201ENST00000474487 481 ntBASIC18.48■□□□□ 0.55
ALX4Q9H161 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.48■□□□□ 0.55
ALX4Q9H161 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALX4Q9H161 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ALX4Q9H161 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ALX4Q9H161 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ALX4Q9H161 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.47■□□□□ 0.55
ALX4Q9H161 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.47■□□□□ 0.55
ALX4Q9H161 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms