Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC245100.8-202ENST00000629247 1058 ntBASIC19.25■□□□□ 0.67
VRK1Q99986 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.25■□□□□ 0.67
VRK1Q99986 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.25■□□□□ 0.67
VRK1Q99986 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 SERBP1P1-201ENST00000396021 1160 ntBASIC19.24■□□□□ 0.67
VRK1Q99986 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.24■□□□□ 0.67
VRK1Q99986 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.24■□□□□ 0.67
VRK1Q99986 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VRK1Q99986 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
VRK1Q99986 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VRK1Q99986 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VRK1Q99986 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
VRK1Q99986 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.23■□□□□ 0.67
VRK1Q99986 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.23■□□□□ 0.67
VRK1Q99986 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.23■□□□□ 0.67
VRK1Q99986 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
VRK1Q99986 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.23■□□□□ 0.67
VRK1Q99986 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.23■□□□□ 0.67
VRK1Q99986 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VRK1Q99986 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VRK1Q99986 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VRK1Q99986 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.22■□□□□ 0.67
VRK1Q99986 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VRK1Q99986 MIR4767-201ENST00000582827 78 ntBASIC19.22■□□□□ 0.67
VRK1Q99986 AC009086.3-201ENST00000623486 1008 ntBASIC19.22■□□□□ 0.67
VRK1Q99986 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.22■□□□□ 0.67
VRK1Q99986 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.22■□□□□ 0.67
VRK1Q99986 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
VRK1Q99986 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VRK1Q99986 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.22■□□□□ 0.67
VRK1Q99986 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
VRK1Q99986 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.21■□□□□ 0.67
VRK1Q99986 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.21■□□□□ 0.67
VRK1Q99986 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VRK1Q99986 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 SUDS3P1-201ENST00000505831 966 ntBASIC19.21■□□□□ 0.67
VRK1Q99986 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VRK1Q99986 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK1Q99986 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VRK1Q99986 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.2■□□□□ 0.66
VRK1Q99986 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VRK1Q99986 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VRK1Q99986 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VRK1Q99986 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.2■□□□□ 0.66
VRK1Q99986 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VRK1Q99986 AL031432.3-201ENST00000607698 485 ntBASIC19.2■□□□□ 0.66
VRK1Q99986 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.2■□□□□ 0.66
VRK1Q99986 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VRK1Q99986 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.2■□□□□ 0.66
VRK1Q99986 C1orf229-201ENST00000623686 2258 ntBASIC19.2■□□□□ 0.66
VRK1Q99986 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK1Q99986 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.19■□□□□ 0.66
VRK1Q99986 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VRK1Q99986 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK1Q99986 AF213884.3-201ENST00000563833 479 ntBASIC19.19■□□□□ 0.66
VRK1Q99986 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
VRK1Q99986 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VRK1Q99986 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VRK1Q99986 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK1Q99986 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK1Q99986 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK1Q99986 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VRK1Q99986 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VRK1Q99986 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms