Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
CPNE1Q99829 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.99■■□□□ 1.11
CPNE1Q99829 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.99■■□□□ 1.11
CPNE1Q99829 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE1Q99829 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE1Q99829 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE1Q99829 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CPNE1Q99829 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.98■■□□□ 1.11
CPNE1Q99829 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE1Q99829 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.98■■□□□ 1.11
CPNE1Q99829 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE1Q99829 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE1Q99829 MIR4787-201ENST00000607364 84 ntBASIC21.98■■□□□ 1.11
CPNE1Q99829 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.98■■□□□ 1.11
CPNE1Q99829 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.98■■□□□ 1.11
CPNE1Q99829 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE1Q99829 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE1Q99829 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE1Q99829 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CPNE1Q99829 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.97■■□□□ 1.11
CPNE1Q99829 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE1Q99829 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.97■■□□□ 1.11
CPNE1Q99829 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE1Q99829 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.97■■□□□ 1.11
CPNE1Q99829 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.97■■□□□ 1.11
CPNE1Q99829 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE1Q99829 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.97■■□□□ 1.11
CPNE1Q99829 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE1Q99829 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE1Q99829 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE1Q99829 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.96■■□□□ 1.11
CPNE1Q99829 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE1Q99829 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE1Q99829 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.96■■□□□ 1.11
CPNE1Q99829 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE1Q99829 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE1Q99829 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
CPNE1Q99829 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CPNE1Q99829 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CPNE1Q99829 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE1Q99829 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CPNE1Q99829 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.95■■□□□ 1.11
CPNE1Q99829 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 AC004687.1-201ENST00000579003 1625 ntBASIC21.95■■□□□ 1.1
CPNE1Q99829 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE1Q99829 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE1Q99829 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
CPNE1Q99829 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.95■■□□□ 1.1
CPNE1Q99829 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.95■■□□□ 1.1
CPNE1Q99829 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.95■■□□□ 1.1
CPNE1Q99829 C17orf82-201ENST00000623772 1530 ntBASIC21.95■■□□□ 1.1
CPNE1Q99829 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CPNE1Q99829 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE1Q99829 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CPNE1Q99829 AC010997.5-201ENST00000609182 354 ntBASIC21.94■■□□□ 1.1
CPNE1Q99829 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE1Q99829 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CPNE1Q99829 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CPNE1Q99829 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE1Q99829 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE1Q99829 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE1Q99829 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE1Q99829 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE1Q99829 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE1Q99829 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE1Q99829 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE1Q99829 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE1Q99829 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE1Q99829 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.93■■□□□ 1.1
CPNE1Q99829 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE1Q99829 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE1Q99829 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CPNE1Q99829 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CPNE1Q99829 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE1Q99829 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE1Q99829 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE1Q99829 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CPNE1Q99829 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE1Q99829 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE1Q99829 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE1Q99829 AC239859.2-201ENST00000444165 318 ntBASIC21.92■■□□□ 1.1
CPNE1Q99829 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE1Q99829 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE1Q99829 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE1Q99829 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 AC007375.3-201ENST00000600936 2314 ntBASIC21.91■■□□□ 1.1
CPNE1Q99829 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms