Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDK5RAP1Q96SZ6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 AC012414.1-201ENST00000556676 535 ntBASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 MIR6821-201ENST00000617625 74 ntBASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CDK5RAP1Q96SZ6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 AC097381.1-201ENST00000429019 1296 ntBASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
CDK5RAP1Q96SZ6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDK5RAP1Q96SZ6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDK5RAP1Q96SZ6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 AC026271.2-201ENST00000428091 497 ntBASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDK5RAP1Q96SZ6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 AC027612.3-201ENST00000413684 1047 ntBASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 MIR5787-201ENST00000611784 55 ntBASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 AC105233.4-201ENST00000642045 216 ntBASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.81■■□□□ 1.24
CDK5RAP1Q96SZ6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.8■■□□□ 1.24
CDK5RAP1Q96SZ6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 OXCT2P1-201ENST00000447263 1535 ntBASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 YBX1P1-201ENST00000445822 960 ntBASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDK5RAP1Q96SZ6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms