Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.67■□□□□ 0.9
NR1H4Q96RI1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 AC244015.2-201ENST00000616358 1861 ntBASIC20.66■□□□□ 0.9
NR1H4Q96RI1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NR1H4Q96RI1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.65■□□□□ 0.9
NR1H4Q96RI1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
NR1H4Q96RI1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NR1H4Q96RI1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.64■□□□□ 0.9
NR1H4Q96RI1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NR1H4Q96RI1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NR1H4Q96RI1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 CR559946.2-201ENST00000623684 991 ntBASIC20.64■□□□□ 0.89
NR1H4Q96RI1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NR1H4Q96RI1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NR1H4Q96RI1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.62■□□□□ 0.89
NR1H4Q96RI1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms