Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC74BQ96LY2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC74BQ96LY2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC74BQ96LY2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC74BQ96LY2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC74BQ96LY2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC74BQ96LY2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC74BQ96LY2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC74BQ96LY2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC74BQ96LY2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 TPRG1LP1-201ENST00000598702 760 ntBASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 AC087239.1-201ENST00000622671 572 ntBASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC74BQ96LY2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC74BQ96LY2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 AC010141.3-201ENST00000456659 717 ntBASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC74BQ96LY2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 KRT18P61-201ENST00000585825 1298 ntBASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC74BQ96LY2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.02■□□□□ 0.95
CCDC74BQ96LY2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC74BQ96LY2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CCDC74BQ96LY2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 BX005040.4-201ENST00000637145 1518 ntBASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC74BQ96LY2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CCDC74BQ96LY2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC74BQ96LY2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC74BQ96LY2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC74BQ96LY2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC74BQ96LY2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21■□□□□ 0.95
CCDC74BQ96LY2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21■□□□□ 0.95
CCDC74BQ96LY2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21■□□□□ 0.95
CCDC74BQ96LY2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21■□□□□ 0.95
CCDC74BQ96LY2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21■□□□□ 0.95
CCDC74BQ96LY2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC74BQ96LY2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC74BQ96LY2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC74BQ96LY2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 SMUG1P1-201ENST00000590640 811 ntBASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC74BQ96LY2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC74BQ96LY2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms