Protein–RNA interactions for Protein: Q96FV3

TSPAN17, Tetraspanin-17, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17Q96FV3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN17Q96FV3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TSPAN17Q96FV3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 MIR6724-1-201ENST00000616420 92 ntBASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 MIR6724-2-201ENST00000616483 92 ntBASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 MIR6724-4-201ENST00000617390 92 ntBASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 MIR6724-3-201ENST00000622482 92 ntBASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TSPAN17Q96FV3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 AC137767.1-201ENST00000602918 1920 ntBASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 AC004687.1-201ENST00000579003 1625 ntBASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TSPAN17Q96FV3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TSPAN17Q96FV3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 C11orf96-202ENST00000528572 1834 ntBASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN17Q96FV3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 UNC93B8-201ENST00000511903 705 ntBASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 AL117332.1-201ENST00000622628 974 ntBASIC21.77■■□□□ 1.08
TSPAN17Q96FV3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN17Q96FV3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TSPAN17Q96FV3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 AC241377.3-202ENST00000626088 1088 ntBASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 AC241585.3-202ENST00000628937 1088 ntBASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 AC245100.8-202ENST00000629247 1058 ntBASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN17Q96FV3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms