Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.19■□□□□ 0.98
NCLNQ969V3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NCLNQ969V3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.19■□□□□ 0.98
NCLNQ969V3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.19■□□□□ 0.98
NCLNQ969V3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NCLNQ969V3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.19■□□□□ 0.98
NCLNQ969V3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.19■□□□□ 0.98
NCLNQ969V3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NCLNQ969V3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
NCLNQ969V3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCLNQ969V3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NCLNQ969V3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NCLNQ969V3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLNQ969V3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.18■□□□□ 0.98
NCLNQ969V3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 ECEL1P1-201ENST00000373592 1742 ntBASIC21.18■□□□□ 0.98
NCLNQ969V3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NCLNQ969V3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.18■□□□□ 0.98
NCLNQ969V3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCLNQ969V3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.17■□□□□ 0.98
NCLNQ969V3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.17■□□□□ 0.98
NCLNQ969V3 AL512631.2-201ENST00000604634 923 ntBASIC21.17■□□□□ 0.98
NCLNQ969V3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NCLNQ969V3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.17■□□□□ 0.98
NCLNQ969V3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.17■□□□□ 0.98
NCLNQ969V3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
NCLNQ969V3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCLNQ969V3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NCLNQ969V3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NCLNQ969V3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 AC127496.7-201ENST00000625110 1798 ntBASIC21.16■□□□□ 0.98
NCLNQ969V3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.16■□□□□ 0.98
NCLNQ969V3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.16■□□□□ 0.98
NCLNQ969V3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NCLNQ969V3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NCLNQ969V3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCLNQ969V3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.15■□□□□ 0.98
NCLNQ969V3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NCLNQ969V3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLNQ969V3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
NCLNQ969V3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLNQ969V3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.15■□□□□ 0.98
NCLNQ969V3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NCLNQ969V3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLNQ969V3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.15■□□□□ 0.98
NCLNQ969V3 MIR4466-201ENST00000606121 54 ntBASIC21.15■□□□□ 0.98
NCLNQ969V3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCLNQ969V3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NCLNQ969V3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCLNQ969V3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCLNQ969V3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCLNQ969V3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.14■□□□□ 0.98
NCLNQ969V3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCLNQ969V3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
NCLNQ969V3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCLNQ969V3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLNQ969V3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLNQ969V3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
NCLNQ969V3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLNQ969V3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCLNQ969V3 AL136116.3-201ENST00000402907 1138 ntBASIC21.14■□□□□ 0.97
NCLNQ969V3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.14■□□□□ 0.97
NCLNQ969V3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.14■□□□□ 0.97
NCLNQ969V3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms