Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RPGRQ92834 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.37■■□□□ 1.97
RPGRQ92834 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.37■■□□□ 1.97
RPGRQ92834 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.37■■□□□ 1.97
RPGRQ92834 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RPGRQ92834 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.37■■□□□ 1.97
RPGRQ92834 AC079630.1-202ENST00000618127 1840 ntBASIC27.37■■□□□ 1.97
RPGRQ92834 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.36■■□□□ 1.97
RPGRQ92834 KRT19P1-201ENST00000405746 1186 ntBASIC27.36■■□□□ 1.97
RPGRQ92834 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RPGRQ92834 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.35■■□□□ 1.97
RPGRQ92834 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RPGRQ92834 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.35■■□□□ 1.97
RPGRQ92834 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RPGRQ92834 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.35■■□□□ 1.97
RPGRQ92834 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RPGRQ92834 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RPGRQ92834 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.34■■□□□ 1.97
RPGRQ92834 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RPGRQ92834 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RPGRQ92834 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RPGRQ92834 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
RPGRQ92834 AC010141.3-201ENST00000456659 717 ntBASIC27.34■■□□□ 1.97
RPGRQ92834 SMUG1P1-201ENST00000590640 811 ntBASIC27.34■■□□□ 1.97
RPGRQ92834 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.34■■□□□ 1.97
RPGRQ92834 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
RPGRQ92834 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRQ92834 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRQ92834 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
RPGRQ92834 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
RPGRQ92834 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRQ92834 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRQ92834 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRQ92834 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.33■■□□□ 1.97
RPGRQ92834 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.33■■□□□ 1.97
RPGRQ92834 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.33■■□□□ 1.97
RPGRQ92834 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.33■■□□□ 1.97
RPGRQ92834 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.33■■□□□ 1.97
RPGRQ92834 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.33■■□□□ 1.97
RPGRQ92834 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.33■■□□□ 1.97
RPGRQ92834 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRQ92834 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RPGRQ92834 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.96
RPGRQ92834 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
RPGRQ92834 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RPGRQ92834 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.32■■□□□ 1.96
RPGRQ92834 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.32■■□□□ 1.96
RPGRQ92834 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RPGRQ92834 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRQ92834 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRQ92834 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.31■■□□□ 1.96
RPGRQ92834 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.31■■□□□ 1.96
RPGRQ92834 AC006970.2-201ENST00000450065 779 ntBASIC27.31■■□□□ 1.96
RPGRQ92834 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.31■■□□□ 1.96
RPGRQ92834 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.31■■□□□ 1.96
RPGRQ92834 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRQ92834 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RPGRQ92834 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.31■■□□□ 1.96
RPGRQ92834 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRQ92834 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
RPGRQ92834 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.3■■□□□ 1.96
RPGRQ92834 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRQ92834 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RPGRQ92834 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.3■■□□□ 1.96
RPGRQ92834 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RPGRQ92834 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRQ92834 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRQ92834 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRQ92834 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRQ92834 AC104771.1-201ENST00000603335 964 ntBASIC27.29■■□□□ 1.96
RPGRQ92834 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.29■■□□□ 1.96
RPGRQ92834 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.29■■□□□ 1.96
RPGRQ92834 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.29■■□□□ 1.96
RPGRQ92834 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RPGRQ92834 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRQ92834 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRQ92834 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRQ92834 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRQ92834 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRQ92834 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.28■■□□□ 1.96
RPGRQ92834 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.28■■□□□ 1.96
RPGRQ92834 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.28■■□□□ 1.96
RPGRQ92834 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRQ92834 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RPGRQ92834 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
RPGRQ92834 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
RPGRQ92834 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.27■■□□□ 1.96
RPGRQ92834 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RPGRQ92834 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RPGRQ92834 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.27■■□□□ 1.96
RPGRQ92834 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RPGRQ92834 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.27■■□□□ 1.96
RPGRQ92834 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms