Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
USP6NLQ92738 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
USP6NLQ92738 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.11■■□□□ 1.61
USP6NLQ92738 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.11■■□□□ 1.61
USP6NLQ92738 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.11■■□□□ 1.61
USP6NLQ92738 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.11■■□□□ 1.61
USP6NLQ92738 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.11■■□□□ 1.61
USP6NLQ92738 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
USP6NLQ92738 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
USP6NLQ92738 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.1■■□□□ 1.61
USP6NLQ92738 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.1■■□□□ 1.61
USP6NLQ92738 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
USP6NLQ92738 AC006970.2-201ENST00000450065 779 ntBASIC25.1■■□□□ 1.61
USP6NLQ92738 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
USP6NLQ92738 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP6NLQ92738 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
USP6NLQ92738 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
USP6NLQ92738 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
USP6NLQ92738 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
USP6NLQ92738 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.09■■□□□ 1.61
USP6NLQ92738 AC068587.7-201ENST00000641602 218 ntBASIC25.09■■□□□ 1.61
USP6NLQ92738 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
USP6NLQ92738 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
USP6NLQ92738 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
USP6NLQ92738 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.08■■□□□ 1.61
USP6NLQ92738 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.08■■□□□ 1.61
USP6NLQ92738 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.08■■□□□ 1.61
USP6NLQ92738 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.08■■□□□ 1.61
USP6NLQ92738 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
USP6NLQ92738 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
USP6NLQ92738 AC011767.1-201ENST00000617410 1153 ntBASIC25.08■■□□□ 1.61
USP6NLQ92738 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.08■■□□□ 1.61
USP6NLQ92738 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
USP6NLQ92738 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP6NLQ92738 AL355802.2-201ENST00000402069 882 ntBASIC25.07■■□□□ 1.6
USP6NLQ92738 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.07■■□□□ 1.6
USP6NLQ92738 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP6NLQ92738 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USP6NLQ92738 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USP6NLQ92738 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP6NLQ92738 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.07■■□□□ 1.6
USP6NLQ92738 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
USP6NLQ92738 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USP6NLQ92738 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USP6NLQ92738 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USP6NLQ92738 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USP6NLQ92738 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.05■■□□□ 1.6
USP6NLQ92738 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP6NLQ92738 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
USP6NLQ92738 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
USP6NLQ92738 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.05■■□□□ 1.6
USP6NLQ92738 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP6NLQ92738 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.05■■□□□ 1.6
USP6NLQ92738 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.05■■□□□ 1.6
USP6NLQ92738 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
USP6NLQ92738 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP6NLQ92738 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.05■■□□□ 1.6
USP6NLQ92738 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
USP6NLQ92738 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 KRT18P11-201ENST00000435214 1283 ntBASIC25.04■■□□□ 1.6
USP6NLQ92738 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.04■■□□□ 1.6
USP6NLQ92738 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.04■■□□□ 1.6
USP6NLQ92738 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
USP6NLQ92738 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
USP6NLQ92738 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 AC020928.2-201ENST00000588717 2197 ntBASIC25.03■■□□□ 1.6
USP6NLQ92738 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 AC010141.3-201ENST00000456659 717 ntBASIC25.03■■□□□ 1.6
USP6NLQ92738 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.03■■□□□ 1.6
USP6NLQ92738 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.03■■□□□ 1.6
USP6NLQ92738 AC004687.1-201ENST00000579003 1625 ntBASIC25.03■■□□□ 1.6
USP6NLQ92738 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP6NLQ92738 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms