Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.02■■□□□ 1.76
STAG1Q8WVM7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
STAG1Q8WVM7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
STAG1Q8WVM7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
STAG1Q8WVM7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
STAG1Q8WVM7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.01■■□□□ 1.75
STAG1Q8WVM7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
STAG1Q8WVM7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
STAG1Q8WVM7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26■■□□□ 1.75
STAG1Q8WVM7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
STAG1Q8WVM7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
STAG1Q8WVM7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 C9orf163-202ENST00000624034 2573 ntBASIC26■■□□□ 1.75
STAG1Q8WVM7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26■■□□□ 1.75
STAG1Q8WVM7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26■■□□□ 1.75
STAG1Q8WVM7 AP005435.1-201ENST00000529293 1178 ntBASIC26■■□□□ 1.75
STAG1Q8WVM7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26■■□□□ 1.75
STAG1Q8WVM7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26■■□□□ 1.75
STAG1Q8WVM7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26■■□□□ 1.75
STAG1Q8WVM7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26■■□□□ 1.75
STAG1Q8WVM7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
STAG1Q8WVM7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
STAG1Q8WVM7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
STAG1Q8WVM7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
STAG1Q8WVM7 AC126544.1-201ENST00000580842 1059 ntBASIC25.98■■□□□ 1.75
STAG1Q8WVM7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
STAG1Q8WVM7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.98■■□□□ 1.75
STAG1Q8WVM7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
STAG1Q8WVM7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
STAG1Q8WVM7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.97■■□□□ 1.75
STAG1Q8WVM7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 LINC01960-201ENST00000563759 1884 ntBASIC25.96■■□□□ 1.75
STAG1Q8WVM7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.96■■□□□ 1.75
STAG1Q8WVM7 AC068587.7-201ENST00000641602 218 ntBASIC25.96■■□□□ 1.75
STAG1Q8WVM7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
STAG1Q8WVM7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
STAG1Q8WVM7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
STAG1Q8WVM7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.95■■□□□ 1.75
STAG1Q8WVM7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
STAG1Q8WVM7 IGHV3-19-201ENST00000521488 291 ntBASIC25.95■■□□□ 1.74
STAG1Q8WVM7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
STAG1Q8WVM7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
STAG1Q8WVM7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
STAG1Q8WVM7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
STAG1Q8WVM7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.94■■□□□ 1.74
STAG1Q8WVM7 RARRES2P6-201ENST00000567333 442 ntBASIC25.94■■□□□ 1.74
STAG1Q8WVM7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
STAG1Q8WVM7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
STAG1Q8WVM7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
STAG1Q8WVM7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
STAG1Q8WVM7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
STAG1Q8WVM7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.93■■□□□ 1.74
STAG1Q8WVM7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.93■■□□□ 1.74
STAG1Q8WVM7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
STAG1Q8WVM7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
STAG1Q8WVM7 AC026271.2-201ENST00000428091 497 ntBASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms