Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC33.25■■■□□ 2.91
ARHGEF40Q8TER5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
ARHGEF40Q8TER5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC33.24■■■□□ 2.91
ARHGEF40Q8TER5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
ARHGEF40Q8TER5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC33.24■■■□□ 2.91
ARHGEF40Q8TER5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC33.24■■■□□ 2.91
ARHGEF40Q8TER5 AC104187.1-201ENST00000607510 612 ntBASIC33.24■■■□□ 2.91
ARHGEF40Q8TER5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
ARHGEF40Q8TER5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
ARHGEF40Q8TER5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC33.22■■■□□ 2.91
ARHGEF40Q8TER5 AC144652.1-201ENST00000609974 1624 ntBASIC33.22■■■□□ 2.91
ARHGEF40Q8TER5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
ARHGEF40Q8TER5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC33.21■■■□□ 2.91
ARHGEF40Q8TER5 APTR-203ENST00000430801 583 ntTSL 5 BASIC33.21■■■□□ 2.91
ARHGEF40Q8TER5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC33.21■■■□□ 2.91
ARHGEF40Q8TER5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
ARHGEF40Q8TER5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
ARHGEF40Q8TER5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC33.2■■■□□ 2.91
ARHGEF40Q8TER5 SLC7A5P1-201ENST00000568957 537 ntBASIC33.2■■■□□ 2.91
ARHGEF40Q8TER5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 KRT18P29-201ENST00000397031 1267 ntBASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 AF201337.1-201ENST00000520239 748 ntBASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
ARHGEF40Q8TER5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 RNA5SP413-201ENST00000516373 109 ntBASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 AC133552.2-202ENST00000575694 574 ntBASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC33.18■■■□□ 2.9
ARHGEF40Q8TER5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ARHGEF40Q8TER5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC33.16■■■□□ 2.9
ARHGEF40Q8TER5 UQCRFS1P1-201ENST00000435169 820 ntBASIC33.16■■■□□ 2.9
ARHGEF40Q8TER5 RARRES2P4-201ENST00000514074 484 ntBASIC33.16■■■□□ 2.9
ARHGEF40Q8TER5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC33.16■■■□□ 2.9
ARHGEF40Q8TER5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC33.16■■■□□ 2.9
ARHGEF40Q8TER5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC33.16■■■□□ 2.9
ARHGEF40Q8TER5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
ARHGEF40Q8TER5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
ARHGEF40Q8TER5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
ARHGEF40Q8TER5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
ARHGEF40Q8TER5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
ARHGEF40Q8TER5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC33.15■■■□□ 2.9
ARHGEF40Q8TER5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
ARHGEF40Q8TER5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARHGEF40Q8TER5 GCSHP5-201ENST00000443090 522 ntBASIC33.14■■■□□ 2.9
ARHGEF40Q8TER5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC33.14■■■□□ 2.9
ARHGEF40Q8TER5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARHGEF40Q8TER5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARHGEF40Q8TER5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARHGEF40Q8TER5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
ARHGEF40Q8TER5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC33.11■■■□□ 2.89
ARHGEF40Q8TER5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
ARHGEF40Q8TER5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
ARHGEF40Q8TER5 LINC01529-204ENST00000636474 1715 ntBASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 AC068587.7-201ENST00000641602 218 ntBASIC33.1■■■□□ 2.89
ARHGEF40Q8TER5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC33.09■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms