Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD6Q8TD26 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD6Q8TD26 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD6Q8TD26 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHD6Q8TD26 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CHD6Q8TD26 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD6Q8TD26 LINC01003-201ENST00000564834 1764 ntBASIC20.3■□□□□ 0.84
CHD6Q8TD26 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHD6Q8TD26 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD6Q8TD26 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD6Q8TD26 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD6Q8TD26 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CHD6Q8TD26 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD6Q8TD26 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD6Q8TD26 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD6Q8TD26 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHD6Q8TD26 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD6Q8TD26 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD6Q8TD26 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 AC141586.4-201ENST00000624558 1573 ntBASIC20.28■□□□□ 0.84
CHD6Q8TD26 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD6Q8TD26 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD6Q8TD26 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD6Q8TD26 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD6Q8TD26 MIPEPP3-201ENST00000412105 444 ntBASIC20.28■□□□□ 0.84
CHD6Q8TD26 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 AC104187.1-201ENST00000607510 612 ntBASIC20.28■□□□□ 0.84
CHD6Q8TD26 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD6Q8TD26 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CHD6Q8TD26 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD6Q8TD26 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD6Q8TD26 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHD6Q8TD26 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHD6Q8TD26 MYCNOS-205ENST00000641950 531 ntBASIC20.27■□□□□ 0.84
CHD6Q8TD26 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CHD6Q8TD26 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.27■□□□□ 0.84
CHD6Q8TD26 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD6Q8TD26 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHD6Q8TD26 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHD6Q8TD26 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CHD6Q8TD26 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD6Q8TD26 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD6Q8TD26 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD6Q8TD26 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD6Q8TD26 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CHD6Q8TD26 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD6Q8TD26 PRKY-204ENST00000533551 1019 ntBASIC20.26■□□□□ 0.83
CHD6Q8TD26 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.26■□□□□ 0.83
CHD6Q8TD26 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.26■□□□□ 0.83
CHD6Q8TD26 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD6Q8TD26 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD6Q8TD26 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD6Q8TD26 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD6Q8TD26 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CHD6Q8TD26 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD6Q8TD26 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD6Q8TD26 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD6Q8TD26 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHD6Q8TD26 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CHD6Q8TD26 AL359736.2-201ENST00000621992 437 ntBASIC20.25■□□□□ 0.83
CHD6Q8TD26 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.25■□□□□ 0.83
CHD6Q8TD26 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD6Q8TD26 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD6Q8TD26 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD6Q8TD26 AC079140.4-201ENST00000507448 529 ntBASIC20.24■□□□□ 0.83
CHD6Q8TD26 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD6Q8TD26 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CHD6Q8TD26 KRT87P-202ENST00000534226 1464 ntBASIC20.24■□□□□ 0.83
CHD6Q8TD26 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD6Q8TD26 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD6Q8TD26 TPM4P1-201ENST00000436100 807 ntBASIC20.24■□□□□ 0.83
CHD6Q8TD26 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD6Q8TD26 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD6Q8TD26 AC055733.4-201ENST00000638462 1354 ntBASIC20.24■□□□□ 0.83
CHD6Q8TD26 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD6Q8TD26 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD6Q8TD26 CD177P1-201ENST00000606252 935 ntBASIC20.23■□□□□ 0.83
CHD6Q8TD26 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD6Q8TD26 AC010536.3-201ENST00000620306 533 ntBASIC20.23■□□□□ 0.83
CHD6Q8TD26 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CHD6Q8TD26 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD6Q8TD26 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD6Q8TD26 DRD5P2-201ENST00000421395 2012 ntBASIC20.23■□□□□ 0.83
CHD6Q8TD26 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD6Q8TD26 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD6Q8TD26 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms