Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AL353803.4-201ENST00000565882 1934 ntBASIC19.14■□□□□ 0.65
LINC01560Q8TB33 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01560Q8TB33 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 AC016769.1-201ENST00000409132 1010 ntBASIC19.13■□□□□ 0.65
LINC01560Q8TB33 AC137761.2-201ENST00000561729 223 ntBASIC19.13■□□□□ 0.65
LINC01560Q8TB33 AC145350.3-201ENST00000569033 163 ntBASIC19.13■□□□□ 0.65
LINC01560Q8TB33 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 TPRG1LP1-201ENST00000598702 760 ntBASIC19.13■□□□□ 0.65
LINC01560Q8TB33 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01560Q8TB33 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 ABCB10P4-201ENST00000566803 2184 ntBASIC19.12■□□□□ 0.65
LINC01560Q8TB33 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 BX005040.4-201ENST00000637145 1518 ntBASIC19.12■□□□□ 0.65
LINC01560Q8TB33 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01560Q8TB33 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 AC080038.1-201ENST00000611274 1154 ntBASIC19.11■□□□□ 0.65
LINC01560Q8TB33 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LINC01560Q8TB33 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 AC068587.7-201ENST00000641602 218 ntBASIC19.1■□□□□ 0.65
LINC01560Q8TB33 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01560Q8TB33 AC004854.2-201ENST00000608450 1441 ntBASIC19.09■□□□□ 0.65
LINC01560Q8TB33 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LINC01560Q8TB33 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01560Q8TB33 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
LINC01560Q8TB33 AC010141.3-201ENST00000456659 717 ntBASIC19.09■□□□□ 0.65
LINC01560Q8TB33 AC087239.1-201ENST00000622671 572 ntBASIC19.09■□□□□ 0.65
LINC01560Q8TB33 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.09■□□□□ 0.65
LINC01560Q8TB33 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01560Q8TB33 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LINC01560Q8TB33 AP004607.4-201ENST00000530158 1459 ntBASIC19.09■□□□□ 0.65
LINC01560Q8TB33 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC01560Q8TB33 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01560Q8TB33 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01560Q8TB33 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01560Q8TB33 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01560Q8TB33 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01560Q8TB33 AL139125.2-201ENST00000623134 1869 ntBASIC19.08■□□□□ 0.65
LINC01560Q8TB33 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.08■□□□□ 0.64
LINC01560Q8TB33 AC006015.1-201ENST00000429970 570 ntBASIC19.08■□□□□ 0.64
LINC01560Q8TB33 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms