Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 AC009086.3-201ENST00000623486 1008 ntBASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF439Q8NDP4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 MIR3621-201ENST00000580529 85 ntBASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 AL117328.2-201ENST00000624617 1940 ntBASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF439Q8NDP4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF439Q8NDP4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 AL356740.2-201ENST00000601559 647 ntBASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF439Q8NDP4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 AL356441.2-201ENST00000443009 864 ntBASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF439Q8NDP4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 AC127496.7-201ENST00000625110 1798 ntBASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 GUSBP5-202ENST00000510805 1989 ntBASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF439Q8NDP4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms