Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 AC022517.1-201ENST00000592429 346 ntBASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SLC38A9Q8NBW4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 ANOS2P-203ENST00000472227 1816 ntBASIC20.81■□□□□ 0.92
SLC38A9Q8NBW4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 TERF1P2-201ENST00000583350 1212 ntBASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC38A9Q8NBW4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 LINC02228-203ENST00000641970 1355 ntBASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A9Q8NBW4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 KRT18P14-201ENST00000534205 1250 ntBASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A9Q8NBW4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A9Q8NBW4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SLC38A9Q8NBW4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.77■□□□□ 0.91
SLC38A9Q8NBW4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A9Q8NBW4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A9Q8NBW4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A9Q8NBW4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC38A9Q8NBW4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A9Q8NBW4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC38A9Q8NBW4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC38A9Q8NBW4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 AC068587.7-201ENST00000641602 218 ntBASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 AC092068.2-201ENST00000590491 1708 ntBASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC38A9Q8NBW4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms