Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.42■■□□□ 1.34
TTC39CQ8N584 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TTC39CQ8N584 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
TTC39CQ8N584 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TTC39CQ8N584 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TTC39CQ8N584 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TTC39CQ8N584 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.41■■□□□ 1.34
TTC39CQ8N584 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TTC39CQ8N584 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TTC39CQ8N584 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TTC39CQ8N584 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TTC39CQ8N584 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC39CQ8N584 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC39CQ8N584 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
TTC39CQ8N584 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.4■■□□□ 1.34
TTC39CQ8N584 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.4■■□□□ 1.34
TTC39CQ8N584 AC010525.1-201ENST00000585559 441 ntBASIC23.4■■□□□ 1.34
TTC39CQ8N584 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.4■■□□□ 1.34
TTC39CQ8N584 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC39CQ8N584 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC39CQ8N584 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.4■■□□□ 1.34
TTC39CQ8N584 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC39CQ8N584 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TTC39CQ8N584 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.39■■□□□ 1.34
TTC39CQ8N584 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TTC39CQ8N584 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.39■■□□□ 1.33
TTC39CQ8N584 AP001330.3-201ENST00000520123 633 ntBASIC23.39■■□□□ 1.33
TTC39CQ8N584 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.39■■□□□ 1.33
TTC39CQ8N584 AL031432.3-201ENST00000607698 485 ntBASIC23.39■■□□□ 1.33
TTC39CQ8N584 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.39■■□□□ 1.33
TTC39CQ8N584 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TTC39CQ8N584 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39CQ8N584 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TTC39CQ8N584 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39CQ8N584 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC39CQ8N584 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39CQ8N584 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TTC39CQ8N584 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39CQ8N584 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39CQ8N584 MIR939-201ENST00000401314 82 ntBASIC23.38■■□□□ 1.33
TTC39CQ8N584 AC091305.1-201ENST00000479476 895 ntBASIC23.38■■□□□ 1.33
TTC39CQ8N584 CA15P2-201ENST00000611168 834 ntBASIC23.38■■□□□ 1.33
TTC39CQ8N584 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.38■■□□□ 1.33
TTC39CQ8N584 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39CQ8N584 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
TTC39CQ8N584 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
TTC39CQ8N584 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.38■■□□□ 1.33
TTC39CQ8N584 RASA4CP-201ENST00000424092 1398 ntBASIC23.38■■□□□ 1.33
TTC39CQ8N584 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC39CQ8N584 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.37■■□□□ 1.33
TTC39CQ8N584 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39CQ8N584 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39CQ8N584 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.37■■□□□ 1.33
TTC39CQ8N584 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39CQ8N584 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39CQ8N584 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC39CQ8N584 MIR638-201ENST00000385237 100 ntBASIC23.37■■□□□ 1.33
TTC39CQ8N584 SUDS3P1-201ENST00000505831 966 ntBASIC23.37■■□□□ 1.33
TTC39CQ8N584 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.37■■□□□ 1.33
TTC39CQ8N584 AC008764.7-201ENST00000593779 1081 ntBASIC23.37■■□□□ 1.33
TTC39CQ8N584 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
TTC39CQ8N584 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC39CQ8N584 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TTC39CQ8N584 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC39CQ8N584 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39CQ8N584 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39CQ8N584 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39CQ8N584 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.36■■□□□ 1.33
TTC39CQ8N584 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TTC39CQ8N584 AC005837.3-201ENST00000612163 286 ntBASIC23.36■■□□□ 1.33
TTC39CQ8N584 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39CQ8N584 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39CQ8N584 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TTC39CQ8N584 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.36■■□□□ 1.33
TTC39CQ8N584 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC39CQ8N584 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TTC39CQ8N584 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.35■■□□□ 1.33
TTC39CQ8N584 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.35■■□□□ 1.33
TTC39CQ8N584 AC010141.3-201ENST00000456659 717 ntBASIC23.35■■□□□ 1.33
TTC39CQ8N584 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39CQ8N584 AF213884.3-201ENST00000563833 479 ntBASIC23.35■■□□□ 1.33
TTC39CQ8N584 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39CQ8N584 AC126544.1-201ENST00000580842 1059 ntBASIC23.35■■□□□ 1.33
TTC39CQ8N584 AL136967.2-201ENST00000623968 743 ntBASIC23.35■■□□□ 1.33
TTC39CQ8N584 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39CQ8N584 AC068473.5-201ENST00000616428 2072 ntBASIC23.35■■□□□ 1.33
TTC39CQ8N584 AC012676.1-201ENST00000574705 1949 ntBASIC23.35■■□□□ 1.33
TTC39CQ8N584 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC39CQ8N584 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC39CQ8N584 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TTC39CQ8N584 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39CQ8N584 AC099791.1-201ENST00000416440 715 ntBASIC23.34■■□□□ 1.33
TTC39CQ8N584 AC142381.2-201ENST00000566120 298 ntBASIC23.34■■□□□ 1.33
TTC39CQ8N584 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TTC39CQ8N584 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TTC39CQ8N584 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC39CQ8N584 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TTC39CQ8N584 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39CQ8N584 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC39CQ8N584 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms