Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 ABHD17AP1-201ENST00000358206 933 ntBASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.05■□□□□ 0.96
COL27A1Q8IZC6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.04■□□□□ 0.96
COL27A1Q8IZC6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 AL050303.2-201ENST00000619798 666 ntBASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 AC068587.7-201ENST00000641602 218 ntBASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.03■□□□□ 0.96
COL27A1Q8IZC6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL27A1Q8IZC6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.02■□□□□ 0.95
COL27A1Q8IZC6 LINC00543-201ENST00000567234 1845 ntBASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 KRT19P1-201ENST00000405746 1186 ntBASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.01■□□□□ 0.95
COL27A1Q8IZC6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL27A1Q8IZC6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL27A1Q8IZC6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL27A1Q8IZC6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COL27A1Q8IZC6 MFSD11-216ENST00000590393 1141 ntBASIC21■□□□□ 0.95
COL27A1Q8IZC6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
COL27A1Q8IZC6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21■□□□□ 0.95
COL27A1Q8IZC6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.99■□□□□ 0.95
COL27A1Q8IZC6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.99■□□□□ 0.95
COL27A1Q8IZC6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL27A1Q8IZC6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL27A1Q8IZC6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 NCF1B-203ENST00000435988 1254 ntBASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 AL355802.2-201ENST00000402069 882 ntBASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 AC087239.1-201ENST00000622671 572 ntBASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 AC020928.2-201ENST00000588717 2197 ntBASIC20.98■□□□□ 0.95
COL27A1Q8IZC6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL27A1Q8IZC6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms