Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DHX40Q8IX18 YBX1P4-201ENST00000392794 808 ntBASIC24.48■■□□□ 1.51
DHX40Q8IX18 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DHX40Q8IX18 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DHX40Q8IX18 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.48■■□□□ 1.51
DHX40Q8IX18 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DHX40Q8IX18 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
DHX40Q8IX18 AL451085.2-201ENST00000605085 799 ntBASIC24.48■■□□□ 1.51
DHX40Q8IX18 LINC01529-204ENST00000636474 1715 ntBASIC24.48■■□□□ 1.51
DHX40Q8IX18 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
DHX40Q8IX18 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.47■■□□□ 1.51
DHX40Q8IX18 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.47■■□□□ 1.51
DHX40Q8IX18 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.47■■□□□ 1.51
DHX40Q8IX18 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DHX40Q8IX18 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DHX40Q8IX18 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DHX40Q8IX18 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.46■■□□□ 1.51
DHX40Q8IX18 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DHX40Q8IX18 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DHX40Q8IX18 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DHX40Q8IX18 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
DHX40Q8IX18 LINC01960-201ENST00000563759 1884 ntBASIC24.45■■□□□ 1.51
DHX40Q8IX18 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.45■■□□□ 1.5
DHX40Q8IX18 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.45■■□□□ 1.5
DHX40Q8IX18 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
DHX40Q8IX18 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DHX40Q8IX18 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.45■■□□□ 1.5
DHX40Q8IX18 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DHX40Q8IX18 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DHX40Q8IX18 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
DHX40Q8IX18 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.44■■□□□ 1.5
DHX40Q8IX18 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
DHX40Q8IX18 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.44■■□□□ 1.5
DHX40Q8IX18 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DHX40Q8IX18 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.44■■□□□ 1.5
DHX40Q8IX18 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
DHX40Q8IX18 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.44■■□□□ 1.5
DHX40Q8IX18 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DHX40Q8IX18 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.44■■□□□ 1.5
DHX40Q8IX18 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DHX40Q8IX18 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DHX40Q8IX18 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DHX40Q8IX18 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
DHX40Q8IX18 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
DHX40Q8IX18 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.43■■□□□ 1.5
DHX40Q8IX18 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
DHX40Q8IX18 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
DHX40Q8IX18 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
DHX40Q8IX18 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
DHX40Q8IX18 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.43■■□□□ 1.5
DHX40Q8IX18 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
DHX40Q8IX18 FP325331.1-202ENST00000623531 1380 ntBASIC24.42■■□□□ 1.5
DHX40Q8IX18 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DHX40Q8IX18 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
DHX40Q8IX18 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
DHX40Q8IX18 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.42■■□□□ 1.5
DHX40Q8IX18 MIR4508-201ENST00000584178 70 ntBASIC24.42■■□□□ 1.5
DHX40Q8IX18 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
DHX40Q8IX18 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.42■■□□□ 1.5
DHX40Q8IX18 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
DHX40Q8IX18 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DHX40Q8IX18 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DHX40Q8IX18 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.41■■□□□ 1.5
DHX40Q8IX18 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DHX40Q8IX18 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.41■■□□□ 1.5
DHX40Q8IX18 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
DHX40Q8IX18 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.4■■□□□ 1.5
DHX40Q8IX18 AC005229.4-201ENST00000610085 2198 ntBASIC24.4■■□□□ 1.5
DHX40Q8IX18 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 AL035685.1-201ENST00000636663 812 ntBASIC24.4■■□□□ 1.5
DHX40Q8IX18 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.4■■□□□ 1.5
DHX40Q8IX18 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
DHX40Q8IX18 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DHX40Q8IX18 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DHX40Q8IX18 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DHX40Q8IX18 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.39■■□□□ 1.5
DHX40Q8IX18 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.39■■□□□ 1.5
DHX40Q8IX18 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DHX40Q8IX18 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
DHX40Q8IX18 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.39■■□□□ 1.49
DHX40Q8IX18 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DHX40Q8IX18 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DHX40Q8IX18 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms