Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB43Q86YS6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB43Q86YS6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB43Q86YS6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB43Q86YS6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB43Q86YS6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB43Q86YS6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB43Q86YS6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB43Q86YS6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 AL358852.1-201ENST00000623174 1268 ntBASIC20.84■□□□□ 0.93
RAB43Q86YS6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB43Q86YS6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB43Q86YS6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB43Q86YS6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB43Q86YS6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB43Q86YS6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB43Q86YS6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.83■□□□□ 0.93
RAB43Q86YS6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.83■□□□□ 0.93
RAB43Q86YS6 OR2I1P-207ENST00000453522 948 ntBASIC20.83■□□□□ 0.93
RAB43Q86YS6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB43Q86YS6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB43Q86YS6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB43Q86YS6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB43Q86YS6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.83■□□□□ 0.92
RAB43Q86YS6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.83■□□□□ 0.92
RAB43Q86YS6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.83■□□□□ 0.92
RAB43Q86YS6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 AC144652.1-201ENST00000609974 1624 ntBASIC20.82■□□□□ 0.92
RAB43Q86YS6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 AC034268.1-201ENST00000441047 882 ntBASIC20.82■□□□□ 0.92
RAB43Q86YS6 YBX1P1-201ENST00000445822 960 ntBASIC20.82■□□□□ 0.92
RAB43Q86YS6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB43Q86YS6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.82■□□□□ 0.92
RAB43Q86YS6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAB43Q86YS6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 LINC01529-204ENST00000636474 1715 ntBASIC20.81■□□□□ 0.92
RAB43Q86YS6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 MIR572-201ENST00000384983 95 ntBASIC20.81■□□□□ 0.92
RAB43Q86YS6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.81■□□□□ 0.92
RAB43Q86YS6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB43Q86YS6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB43Q86YS6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAB43Q86YS6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RAB43Q86YS6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RAB43Q86YS6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB43Q86YS6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB43Q86YS6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB43Q86YS6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB43Q86YS6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms