Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF180Q86T96 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF180Q86T96 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RNF180Q86T96 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 AC010141.3-201ENST00000456659 717 ntBASIC24.61■■□□□ 1.53
RNF180Q86T96 SMUG1P1-201ENST00000590640 811 ntBASIC24.61■■□□□ 1.53
RNF180Q86T96 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.61■■□□□ 1.53
RNF180Q86T96 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 AC004687.1-201ENST00000579003 1625 ntBASIC24.61■■□□□ 1.53
RNF180Q86T96 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF180Q86T96 MIR663A-201ENST00000385250 93 ntBASIC24.6■■□□□ 1.53
RNF180Q86T96 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF180Q86T96 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
RNF180Q86T96 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
RNF180Q86T96 ESRRAP2-201ENST00000418437 1549 ntBASIC24.6■■□□□ 1.53
RNF180Q86T96 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF180Q86T96 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.59■■□□□ 1.53
RNF180Q86T96 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RNF180Q86T96 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.59■■□□□ 1.53
RNF180Q86T96 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RNF180Q86T96 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF180Q86T96 GPX1P1-201ENST00000388829 606 ntBASIC24.59■■□□□ 1.53
RNF180Q86T96 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.59■■□□□ 1.53
RNF180Q86T96 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.59■■□□□ 1.53
RNF180Q86T96 AC079140.4-201ENST00000507448 529 ntBASIC24.59■■□□□ 1.53
RNF180Q86T96 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF180Q86T96 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF180Q86T96 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RNF180Q86T96 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF180Q86T96 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF180Q86T96 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
RNF180Q86T96 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.58■■□□□ 1.53
RNF180Q86T96 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.58■■□□□ 1.53
RNF180Q86T96 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RNF180Q86T96 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
RNF180Q86T96 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
RNF180Q86T96 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.57■■□□□ 1.52
RNF180Q86T96 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF180Q86T96 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.57■■□□□ 1.52
RNF180Q86T96 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.57■■□□□ 1.52
RNF180Q86T96 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
RNF180Q86T96 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.56■■□□□ 1.52
RNF180Q86T96 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF180Q86T96 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF180Q86T96 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF180Q86T96 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.56■■□□□ 1.52
RNF180Q86T96 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.56■■□□□ 1.52
RNF180Q86T96 TMEM191A-211ENST00000637163 1067 ntBASIC24.56■■□□□ 1.52
RNF180Q86T96 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
RNF180Q86T96 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RNF180Q86T96 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF180Q86T96 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RNF180Q86T96 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF180Q86T96 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.55■■□□□ 1.52
RNF180Q86T96 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF180Q86T96 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF180Q86T96 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RNF180Q86T96 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RNF180Q86T96 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF180Q86T96 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.54■■□□□ 1.52
RNF180Q86T96 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF180Q86T96 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF180Q86T96 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RNF180Q86T96 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF180Q86T96 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RNF180Q86T96 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RNF180Q86T96 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.54■■□□□ 1.52
RNF180Q86T96 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RNF180Q86T96 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.54■■□□□ 1.52
RNF180Q86T96 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.53■■□□□ 1.52
RNF180Q86T96 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF180Q86T96 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RNF180Q86T96 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
RNF180Q86T96 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF180Q86T96 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF180Q86T96 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF180Q86T96 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF180Q86T96 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.53■■□□□ 1.52
RNF180Q86T96 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.53■■□□□ 1.52
RNF180Q86T96 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF180Q86T96 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF180Q86T96 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.53■■□□□ 1.52
RNF180Q86T96 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF180Q86T96 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.52■■□□□ 1.52
RNF180Q86T96 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
RNF180Q86T96 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF180Q86T96 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms