Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 AC012414.1-201ENST00000556676 535 ntBASIC19.42■□□□□ 0.7
FREM1Q5H8C1 AC087623.3-201ENST00000607047 1098 ntBASIC19.42■□□□□ 0.7
FREM1Q5H8C1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 TSPY26P-201ENST00000476365 1326 ntBASIC19.42■□□□□ 0.7
FREM1Q5H8C1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FREM1Q5H8C1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.42■□□□□ 0.7
FREM1Q5H8C1 AC034268.1-201ENST00000441047 882 ntBASIC19.42■□□□□ 0.7
FREM1Q5H8C1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 DUSP8P5-201ENST00000422884 1815 ntBASIC19.41■□□□□ 0.7
FREM1Q5H8C1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 IGHV3-19-201ENST00000521488 291 ntBASIC19.41■□□□□ 0.7
FREM1Q5H8C1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FREM1Q5H8C1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.4■□□□□ 0.7
FREM1Q5H8C1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.39■□□□□ 0.7
FREM1Q5H8C1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FREM1Q5H8C1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
FREM1Q5H8C1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FREM1Q5H8C1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 AL031602.1-201ENST00000633169 911 ntBASIC19.37■□□□□ 0.69
FREM1Q5H8C1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FREM1Q5H8C1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 AC087239.1-201ENST00000622671 572 ntBASIC19.36■□□□□ 0.69
FREM1Q5H8C1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
FREM1Q5H8C1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FREM1Q5H8C1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms