Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USH1GQ495M9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USH1GQ495M9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
USH1GQ495M9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USH1GQ495M9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.3■■□□□ 1.64
USH1GQ495M9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.3■■□□□ 1.64
USH1GQ495M9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
USH1GQ495M9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USH1GQ495M9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
USH1GQ495M9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 YBX1P1-201ENST00000445822 960 ntBASIC25.29■■□□□ 1.64
USH1GQ495M9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.29■■□□□ 1.64
USH1GQ495M9 AL354811.1-201ENST00000610286 706 ntBASIC25.29■■□□□ 1.64
USH1GQ495M9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
USH1GQ495M9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.29■■□□□ 1.64
USH1GQ495M9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.29■■□□□ 1.64
USH1GQ495M9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
USH1GQ495M9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.29■■□□□ 1.64
USH1GQ495M9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USH1GQ495M9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
USH1GQ495M9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
USH1GQ495M9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USH1GQ495M9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.28■■□□□ 1.64
USH1GQ495M9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.28■■□□□ 1.64
USH1GQ495M9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USH1GQ495M9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.28■■□□□ 1.64
USH1GQ495M9 AC105233.4-201ENST00000642045 216 ntBASIC25.28■■□□□ 1.64
USH1GQ495M9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
USH1GQ495M9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USH1GQ495M9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USH1GQ495M9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USH1GQ495M9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USH1GQ495M9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.28■■□□□ 1.64
USH1GQ495M9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.27■■□□□ 1.64
USH1GQ495M9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USH1GQ495M9 AC027612.3-201ENST00000413684 1047 ntBASIC25.27■■□□□ 1.64
USH1GQ495M9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.27■■□□□ 1.64
USH1GQ495M9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USH1GQ495M9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USH1GQ495M9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 AL162430.1-201ENST00000480705 870 ntBASIC25.26■■□□□ 1.63
USH1GQ495M9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.26■■□□□ 1.63
USH1GQ495M9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.26■■□□□ 1.63
USH1GQ495M9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
USH1GQ495M9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.26■■□□□ 1.63
USH1GQ495M9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USH1GQ495M9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
USH1GQ495M9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
USH1GQ495M9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USH1GQ495M9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USH1GQ495M9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.25■■□□□ 1.63
USH1GQ495M9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.25■■□□□ 1.63
USH1GQ495M9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.25■■□□□ 1.63
USH1GQ495M9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.25■■□□□ 1.63
USH1GQ495M9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.25■■□□□ 1.63
USH1GQ495M9 AC092666.2-201ENST00000613287 246 ntBASIC25.25■■□□□ 1.63
USH1GQ495M9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USH1GQ495M9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
USH1GQ495M9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USH1GQ495M9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
USH1GQ495M9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USH1GQ495M9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USH1GQ495M9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USH1GQ495M9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USH1GQ495M9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USH1GQ495M9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.24■■□□□ 1.63
USH1GQ495M9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.24■■□□□ 1.63
USH1GQ495M9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.24■■□□□ 1.63
USH1GQ495M9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USH1GQ495M9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.24■■□□□ 1.63
USH1GQ495M9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
USH1GQ495M9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.23■■□□□ 1.63
USH1GQ495M9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.23■■□□□ 1.63
USH1GQ495M9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.23■■□□□ 1.63
USH1GQ495M9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.23■■□□□ 1.63
USH1GQ495M9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USH1GQ495M9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
USH1GQ495M9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.23■■□□□ 1.63
USH1GQ495M9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
USH1GQ495M9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.23■■□□□ 1.63
USH1GQ495M9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USH1GQ495M9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.23■■□□□ 1.63
USH1GQ495M9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USH1GQ495M9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms