Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 AC004448.1-201ENST00000458332 883 ntBASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 DUX4L19-201ENST00000557448 1267 ntBASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 AL136967.2-201ENST00000623968 743 ntBASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 AC097381.1-201ENST00000429019 1296 ntBASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRFAM7AQ494W8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 SNX5-217ENST00000606557 1087 ntBASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 GUSBP5-202ENST00000510805 1989 ntBASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRFAM7AQ494W8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CHRFAM7AQ494W8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CHRFAM7AQ494W8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRFAM7AQ494W8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRFAM7AQ494W8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRFAM7AQ494W8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 MIR939-201ENST00000401314 82 ntBASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 AC091305.1-201ENST00000479476 895 ntBASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 LINC00526-201ENST00000581067 1875 ntBASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 AL022069.1-201ENST00000568025 1636 ntBASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CHRFAM7AQ494W8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 AL162430.1-201ENST00000480705 870 ntBASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CHRFAM7AQ494W8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRFAM7AQ494W8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 AP001330.3-201ENST00000520123 633 ntBASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRFAM7AQ494W8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms