Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 TPRG1LP1-201ENST00000598702 760 ntBASIC25.89■■□□□ 1.74
SHROOM1Q2M3G4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.89■■□□□ 1.73
SHROOM1Q2M3G4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SHROOM1Q2M3G4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.88■■□□□ 1.73
SHROOM1Q2M3G4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHROOM1Q2M3G4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHROOM1Q2M3G4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.85■■□□□ 1.73
SHROOM1Q2M3G4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SHROOM1Q2M3G4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.83■■□□□ 1.73
SHROOM1Q2M3G4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 SMUG1P1-201ENST00000590640 811 ntBASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
SHROOM1Q2M3G4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHROOM1Q2M3G4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.81■■□□□ 1.72
SHROOM1Q2M3G4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.81■■□□□ 1.72
SHROOM1Q2M3G4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.81■■□□□ 1.72
SHROOM1Q2M3G4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms